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Pull requests: CovertLab/vEcoli

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Pull requests list

fix(metabolism_redux): cvxpy solver fallback on GLOP failure long ci PR nearly ready to merge so run longer CI tests
#440 opened Jul 27, 2026 by eagmon Contributor Loading…
4
Make configurable change to define reaction flux bounds in metabolism.py
#438 opened Jul 22, 2026 by heenasaqib Contributor Loading…
12
Read causality-network dynamics from Parquet via DuckDB
#434 opened Jul 10, 2026 by jussty Loading…
Security updates
#433 opened Jul 10, 2026 by github-actions Bot Loading…
Adopt ecoli-sources data bundle as the ParCa input source long ci PR nearly ready to merge so run longer CI tests
#426 opened May 28, 2026 by cplong90 Contributor Loading…
13 of 15 tasks
@cplong90
5
Introduce ecoli.library.xarray_emitter
#414 opened Apr 30, 2026 by ntfrgl • Draft
44
Fix Parquet emitter issues for colony simulations long ci PR nearly ready to merge so run longer CI tests
#390 opened Feb 6, 2026 by katha815 Loading…
9
Update media_recipes.tsv
#356 opened Sep 18, 2025 by HSMSC Loading…
Add new method for FBA analysis
#349 opened Jul 28, 2025 by Shu-Feather Contributor Loading…
37
Kinetic tRNA charging port
#305 opened May 3, 2025 by thalassemia Contributor Loading…
3
Small changes.
#271 opened Jan 17, 2025 by cyrus-bio Contributor Loading…
8
Adding new environments analysis, an experiment file, and a test
#205 opened Jul 28, 2023 by timzjing Contributor Loading…
2
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