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Batch views should also list all entries associated with a given batch #23
Description
fellows@shh.mpg.de@dat4903339:~/bin/sidora.cli$ sidora-cli view -t extract -i 'EXB034.A27'
|Field |Value |
|:------------------------------|:-------------------------------|
|Sample |4916 |
|Extract_Id |27 |
|Full_Extract_Id |EXB034.A27 |
|Protocol |calculus DNA only protocol 2017 |
|Worker |Raphaela Stahl |
|Creation_Date |2019-10-28 13:07:38 |
|Experiment_Date |2019-10-28 13:07:00 |
|Batch |Ex26_RS_2019-10-28_CalculusLena |
|Robot |FALSE |
|Quantity_Sample |0 |
|Quantity_Lysate |0 |
|External_Extract_Id | |
|Position_on_Plate | |
|Location_Room |Ancient Lab/204d (Extraction 3) |
|Location |1/5 |
|Ethically_culturally_sensitive |FALSE |
|Files |0 |
|Notes | |
|Tags | |
|Projects | |
fellows@shh.mpg.de@dat4903339:~/bin/sidora.cli$ sidora-cli view -t batch -i 'Ex26_RS_2019-10-28_CalculusLena'
|Field |Value |
|:-------------|:-------------------------------------------------------|
|Type |NA |
|Name |Ex26_RS_2019-10-28_CalculusLena |
|Worker |Raphaela Stahl |
|Creation_Date |2019-10-28 13:07:38 |
|Notes |Extraction performed by Lena Semerau and Raphaela Stahl |
|Tags |Tina Warinner |
|Projects | |
|Files |0 |
But there is no way of me knowing what other samples are associated in that batch.
Activity
jfy133 commentedon Jul 2, 2020
Batch view on the right from the pandora web page
(Note different search term to published data for privacy)
nevrome commentedon Jul 2, 2020
I guess that would be a job for
summarise? Or maybe an integration ofviewandsummariseto have one module to show meaningful, human readable information about individual entities.jfy133 commentedon Jul 2, 2020
Yes, good point. I guess it depends if summarise will actually list all the IDs or not or just the 'number'. I've not played around with summarise much I have to admit ;)