Repository navigation
Cannot run CPC2 #20
Description
Upon trying to run the CPC2 script I am running into an error with the required packages. The "seqio" package no longer supports python versions less than 3.10, and I haven't been successful installing an older version. Do you have suggestions for how to work around this issue?
Activity
ewilliams17 commentedon Mar 13, 2025
It's giving the following error message: Traceback (most recent call last):
File "CPC2.mod.py", line 315, in
sys.exit(__main())
File "CPC2.mod.py", line 38, in __main
if calculate_potential(options.fasta,strand,options.outfile):
File "CPC2.mod.py", line 254, in calculate_potential
for seq in seqio.fasta_read(fasta):
AttributeError: 'module' object has no attribute 'fasta_read'